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Foundational Sciences · Physiology

Renal Physiology: Nephron Transport & Clearance

A Step 1-focused walk through nephron segment transport (transporters, % Na⁺ reabsorbed, diuretic sites) and the clearance framework (GFR, RPF, FF, TF/P, glucose titration, free-water clearance), tied to the hormonal loops and channelopathies the boards test. Emphasis on the exact numbers, curves, and mechanism-to-disease correlations.

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The nephron as a reabsorption assembly line

The kidneys filter roughly 180 L/day and excrete only ~1.5 L — meaning ~99% of filtrate is reclaimed, segment by segment. Every apical transporter you must know is ultimately powered by the basolateral Na⁺/K⁺-ATPase, which keeps intracellular Na⁺ low and drives secondary-active transport at the lumen.

Organize the tubule into three jobs:

  1. Bulk isosmotic reabsorption — the proximal convoluted tubule (PCT) reclaims ~2/3 of everything.
  2. Building the medullary gradient — the loop of Henle separates salt from water (countercurrent multiplier).
  3. Fine, hormone-tuned adjustment — the distal convoluted tubule (DCT) and collecting duct set final Na⁺, K⁺, H⁺, Ca²⁺, and water.

Clearance is the quantitative overlay that converts a urine sample into whole-organ function — it tells you GFR, renal plasma flow, and exactly how each solute is handled.

Clearance & flow — the must-know numbers
  • Clearance: C = (U × V) / P (mL/min) — the volume of plasma completely cleared of a substance per minute.
  • Inulin clearance = GFR (freely filtered, neither reabsorbed nor secreted). Normal GFR ≈ 100–125 mL/min.
  • Creatinine clearance slightly OVERestimates GFR — creatinine is minimally secreted by the PCT.
  • PAH clearance = effective renal plasma flow (RPF) — filtered plus secreted (~90% cleared in one pass). eRPF ≈ 600 mL/min.
  • RBF = RPF / (1 − Hct)1000–1200 mL/min (~20–25% of cardiac output).
  • Filtration fraction: FF = GFR / RPF ≈ 20%.
  • Filtered load = GFR × plasma concentration. Net Excretion = Filtered − Reabsorbed + Secreted.

Nephron segments, transporters & diuretic sites

SegmentNa⁺ reabsorbedKey apical transporterH₂O permeable?Drug / target
PCT~65–67%NHE3 (Na⁺/H⁺), SGLT2 (glucose), Na-Pᵢ, Na-AAYes (isosmotic)Acetazolamide (carbonic anhydrase → HCO₃⁻ loss)
Thin descending limbpassive H₂O efflux; solute-impermeableVery highMannitol (osmotic)
Thick ascending limb (TAL)~25%NKCC2 (Na-K-2Cl)ImpermeableLoop diuretics (furosemide); "diluting segment"
Early DCT~5%NCC (Na-Cl); TRPV5 (PTH-driven Ca²⁺)ImpermeableThiazides
Collecting duct~3–5%ENaC (principal, aldosterone); AQP2 (ADH)ADH-dependentAmiloride (ENaC), spironolactone (aldo R)
Schematic of the nephron indicating where substances are filtered, reabsorbed, and secreted along the tubule, with arrows for direction of transport.
Filtration vs reabsorption vs secretion along the nephron — the basis of the clearance/excretion equation. · Wikimedia Commons — OpenStax College — CC BY 3.0, via Wikimedia Commons

TF/P ratios, the glucose curve & free-water clearance

TF/P (tubular fluid / plasma) ratios track handling along the tubule:

  • TF/P inulin rises to ~3 by the end of the PCT because inulin isn't reabsorbed — as ~67% of water leaves, its concentration triples. Formula: TF/P inulin = 1 / (fraction of water remaining).
  • [TF/P]ₓ ÷ [TF/P]inulin = fraction of filtered X remaining. If this ratio < 1, X was net reabsorbed; > 1, net secreted.
  • TF/P Na⁺ ≈ 1.0 through the PCT (reabsorption is isosmotic).

Glucose titration curve (classic Step 1 graph):

  • Filtered load = GFR × plasma glucose. Below threshold, reabsorption (SGLT2) matches filtration → no glucosuria.
  • Threshold ≈ 200 mg/dL; transport maximum (Tm) ≈ 375 mg/min (saturation).
  • Splay = glucosuria appears before Tm because nephrons are heterogeneous and the transporter's affinity is low.
  • Pregnancy lowers the threshold (↑GFR) → benign glucosuria.

Free-water clearance: C_H₂O = V − C_osm, where C_osm = (U_osm × V) / P_osm.

  • Positive C_H₂O = dilute urine / net water excretion (water loading, diabetes insipidus).
  • Negative C_H₂O = concentrated urine / net water conservation (dehydration, ADH acting, SIADH).
Diagram of the nephron showing each segment (PCT, loop of Henle, DCT, collecting duct) with its ion transporters, water permeability, and percentage of solute reabsorption.
Segment-by-segment transport map of the nephron — pair this with the transporter table. · Wikimedia Commons — Madhero88 — CC BY 3.0, via Wikimedia Commons
Glomerular hemodynamics — arterioles set GFR, RPF & FF
  • Afferent constriction (e.g., NSAIDs block vasodilatory prostaglandins): ↓GFR, ↓RPF, FF ~ unchanged.
  • Efferent constriction (Angiotensin II, physiologic dose): ↑GFR, ↓RPF, ↑FF.
  • Efferent dilation (ACE inhibitors / ARBs): ↓GFR, ↑RPF, ↓FF → can precipitate acute kidney injury in bilateral renal artery stenosis.
  • ↑Plasma oncotic pressure (dehydration/hypergammaglobulinemia): ↓GFR. ↓Plasma protein: ↑GFR. Ureteral obstruction (↑Bowman hydrostatic): ↓GFR.
  • ↑FF → ↑peritubular oncotic pressure → ↑PCT Na⁺/H₂O reabsorption (basis of AT II–driven Na⁺ retention).
  • Autoregulation keeps GFR/RBF nearly constant over MAP ~80–180 mmHg via the myogenic reflex + tubuloglomerular feedback (macula densa senses ↑NaCl → adenosine → afferent constriction).

Hormones acting on the nephron

HormoneSiteAction
AldosteronePrincipal + α-intercalated cells (CD)Principal: ↑ENaC + Na⁺/K⁺-ATPase → Na⁺ reabsorption & K⁺ secretion; α-intercalated: ↑H⁺-ATPase → H⁺ secretion
ADH (vasopressin, V2)Collecting ductInserts AQP2 → water reabsorption; ↑urea reabsorption (UT-A1) in medullary CD
PTHPCT + DCTPCT: inhibits Na-Pᵢ → phosphaturia, ↑1α-hydroxylase; DCT: ↑Ca²⁺ reabsorption (TRPV5)
Angiotensin IIPCT + efferent arteriole↑NHE3 (Na⁺/HCO₃⁻ reabsorption, "contraction alkalosis"); constricts efferent → ↑FF
ANP / BNPAfferent + efferent art., CDDilates afferent and constricts efferent → ↑GFR; inhibits Na⁺ reabsorption & renin → natriuresis
Tubular channelopathies = "built-in diuretics"

Mechanism → vignette. Each inherited defect mimics a diuretic acting at that segment.

  • Bartter syndrome — loss of NKCC2 / ROMK / ClC-Kb in the TAL = "congenital loop diuretic." Childhood onset: hypokalemic metabolic alkalosis + hyperCalciuria (± nephrocalcinosis), normal-to-low BP.
  • Gitelman syndrome — loss of NCC in the DCT = "congenital thiazide." Milder/later: hypokalemic metabolic alkalosis, HYPOcalciuria, HYPOmagnesemia, normal BP.
  • Liddle syndromeENaC gain-of-function (channel stuck open): unregulated Na⁺ retention → HTN, hypokalemia, metabolic alkalosis, but LOW renin AND LOW aldosterone. Treat with amiloride/triamterene (block ENaC directly) — spironolactone won't work.
  • Contrast: Conn (primary hyperaldosteronism) gives the same electrolytes but HIGH aldosterone with low renin; AME (apparent mineralocorticoid excess)11β-HSD2 deficiency or licorice — lets cortisol activate the mineralocorticoid receptor → identical picture with low aldosterone.
ADH disorders — reading water handling

ADH sets collecting-duct water permeability (AQP2). Follow serum Na⁺, urine osmolality, and free-water clearance.

  • Central DI (no ADH) vs Nephrogenic DI (V2 receptor unresponsive — lithium [most common], hypercalcemia, hypokalemia, demeclocycline): both → dilute urine, high free-water clearance, hypernatremia/polyuria. Water-deprivation + desmopressin (DDAVP): urine osmolality rises with DDAVP in central DI, fails to rise in nephrogenic DI.
  • SIADH — inappropriate ADH → water retention → euvolemic hyponatremia with inappropriately concentrated urine (high U_osm, negative free-water clearance). Causes: small cell lung carcinoma, CNS disease, drugs (carbamazepine, SSRIs, cyclophosphamide). Correct hyponatremia slowly to avoid osmotic demyelination syndrome.
  • Bonus PCT vignette: generalized proximal failure = Fanconi syndrome → glucosuria (with normal serum glucose), aminoaciduria, phosphaturia, type 2 (proximal) RTA. Causes: Wilson disease, multiple myeloma, tenofovir, expired tetracyclines, lead.
High-yield mnemonics (the real ones)
  • Calcium & diuretics: "Loops Lose calcium (hyperCalciuria); thiaZides hold on (hypoCalciuria)." → thiazides treat Ca²⁺ stones & osteoporosis; loops treat hypercalcemia.
  • Bartter vs Gitelman: Bartter hits the loop — higher up, more severe, hypercalciuria (like a loop diuretic). Gitelman = Gentler, DCT/thiazide-like, hypocalciuria + low Mg²⁺.
  • Liddle → aMILoride: "Liddle loves amiLoride" — block ENaC directly (spironolactone fails).
  • ADH = "Add Water" — V2 → aquaporins → water reabsorption.
  • SGLT2 = "sweet pee" — SGLT2 inhibitors ("-gliflozins") deliberately cause glucosuria.
  • Tracers: "PAH = Plasma flow (RPF); inulin = filtration (GFR)."

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